October 9th, 2000
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- To: Faculty and Staff
- From: Dr. John Harwood, Director, NMR Facilities
- Re: NMR Facility News
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- The purpose of this memo is to brief everyone on what has been happening
recently, and what will be happening in the near future, with our NMR Facilities.
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- RRC-East NMR Lab - upgrades and improvements
- We have a few developments to report regarding the equipment in this
lab.
- 1. CP-MAS upgrade (DRX-500). The CP-MAS Level-1 upgrade was installed
on our DRX-500 in June of this year. This upgrade was funded by an NSF-CRIF
proposal submitted in January 1999. This installation works very nicely
and has been tested with solid samples from the Frydman group and with
supported-phase samples from the Crich group. Installation of the CP-MAS
probe takes approximately 30 minutes and the automatic spinning regulation
system is easy to use and very stable. We anticipate on average one to
two days per week solids usage on the DRX-500 as the four faculty members
who contributed to the CRIF proposal get their projects underway.
- 2. BBO Z-gradient probe (DPX-400). At the moment, of our two new NMR's,
only the DRX-500 has a conventional-geometry broadband-observe 5mm probe.
This type of probe is used for direct 13C (or other X-nucleus) observation,
and this type of usage is very common with our user base. In order to maximize
the utility of our new NMR lab, I have ordered a similar probe for our
new DPX-400, to complement the current inverse-geometry probe. This new
5mm BBO probe will be equipped with a Z-gradient coil for gradient-enhanced
2D spectroscopy (the 5mm BBO probe on the DRX-500 was upgraded to Z-gradient
capability early this year). This probe will allow maximum flexibility
in scheduling and will permit the observation of 13C spectra at high sensitivity
even when the DRX-500 is unavailable. The inverse probe will continue to
be available for the DPX-400 for high-sensitivity 1H applications. We anticipate
delivery of this new probe by the end of the year.
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- Varian Mercury-Vx-300
- Our Varian VXR-300S NMR spectrometer was upgraded in May and June of
this year to a new Mercury-Vx console with a 50-sample sample-changer accessory.
The console upgrade included a new Sun Ultra-5 host computer which is much
faster than the old Sun 3/60. A new Nalorac QNP+ 5mm probe was obtained
to complement the new console and this was installed last month, thus making
the Varian effectively an all-new system. Funding for this new equipment
was provided by the Dreyfus Foundation and the NSF CCLI A&I program,
as well as UIC matching funds. I will be sending out another memo shortly
regarding the need to expand the usage of this spectrometer in our undergraduate
teaching labs.
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- Despite a few minor installation glitches the new Mercury system is
running very well. The new computer is extremely fast and the console performs
very well and seems quite robust. The sample-changer hardware and automation
software have been set up and also work nicely, although we have not yet
tested the equipment with a full complement of fifty samples. The Nalorac
QNP+ probe allows for observation of any of the four nuclei 1H, 19F, 31P
and 13C without retuning the probe, with the option of observing other
X-nuclei being available after probe retuning by NMR facility staff. Speaking
of staff, Alex Bischoff deserves a big thank-you for all of his assistance
with the installation and setup of the new Varian system.
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- Please keep in mind that although the sample-changer was purchased
using funding obtained from teaching-related proposals it can be used for
research when not being used for teaching. Thus if anyone has a series
of many samples to be run back-to-back this equipment is perfectly suited
to the task.
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- Off-Line NMR data processing
- 1. RRC-East NMR lab. We recently purchased a new SGI O2 workstation
(R5200) and this has been installed in the RRC-East NMR lab along with
a new laser printer. We have purchased a license to run Bruker's XWinNMR
package on this new computer, and this software has been installed and
is now available for use. This workstation provides off-line NMR data processing
capability using the same software that is on our new Bruker Avance NMR's,
and any Avance user is automatically granted access to this new workstation.
In addition, NMR data is shared between the new workstation and the two
spectrometers so that it is not necessary to manually move data around
between the computers. Other highlights of the new workstation include
faster processing and printing than the Avance host computers, and easy
access by any user to the Jaz drive (for data archiving).
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- 2. Computer Facility. A new 667-MHz Pentium-III PC has been purchased
and installed in our departmental computer facility (4114 SES). This PC
is equipped with the 2D version of NUTS, which is a third-party NMR data
processing program. This software can process 1D and 2D NMR data obtained
on any of our spectrometers. The software is easy to use and quite fast
on this PC. One important facet of this software is that it provides the
ability to cut-and-paste spectra into e.g. word-processing documents. To
facilitate this, Microsoft Office has been installed on this PC. Another
useful application of this PC is for data archiving: using the WS-FTP software
package one can copy data directories from our Avance spectrometers to
the PC where they can then be archived to the built-in ZIP drive. I am
very grateful to Don Rippon for his extensive assistance in getting this
PC set up.
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- Web-based instrument reservation
- One of our ongoing projects has been the development of a web-based
instrument time reservation system. Recently, Devin Sears completed the
adaptation of some freeware scheduling software available from Indiana
University to our Facility's needs. We are in the final stages of testing
this software. After this, we can decide how to migrate our current instrument
rime reservation system to the on-line system. A big thank-you goes to
Devin for the huge amount of effort he has put into this project.
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- In closing, if anyone has any questions or comments, please don't hesitate
to contact me.